Protein ZmHAG27 | |
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Information | |
Coreg Name: | ZmHAG27 |
Species: | Maize |
Coreg Family: | GNAT |
Gene Name(Synonym): | HAGTF27 |
Uniprot ID: | K7UYW9 |
Subgenome: | 2 |
ZmHAG27 is a protein in the GNAT family.
Overview of domains present in v5 transcripts | |
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PF00583 | |
Zm00001eb275010_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
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Zm00001d036716 | DAPseq | sequence | fimo | position | |
Zm00001d036716 | DAPseq | sequence | fimo | position | |
Zm00001d036716 | ChIPseq | sequence | fimo | position | |
Zm00001d036716 | PChIPseq | sequence | fimo | position |
MVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEWCRERGAAHATMATT
TSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFLPADMPALLAHKLTL
GTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSVPDIFRPFGAYLLYG
LRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNNADDEDGWPAPAVRN
CPVRRSPRVLT
MVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEWCRERGAAHATMATT
TSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFLPADMPALLAHKLTL
GTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSVPDIFRPFGAYLLYG
LRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNNADDEDGWPAPAVRN
CPVRRSPRVLT
MVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEWCRERGAAHATMATT
TSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFLPADMPALLAHKLTL
GTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSVPDIFRPFGAYLLYG
LRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNNADDEDGWPAPAVRN
CPVRRSPRVLT
MVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEWCRERGAAHATMATT
TSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFLPADMPALLAHKLTL
GTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSVPDIFRPFGAYLLYG
LRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNNADDEDGWPAPAVRN
CPVRRSPRVLT
MVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEWCRERGAAHATMATT
TSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFLPADMPALLAHKLTL
GTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSVPDIFRPFGAYLLYG
LRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNNADDEDGWPAPAVRN
CPVRRSPRVLT
MVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEWCRERGAAHATMATT
TSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFLPADMPALLAHKLTL
GTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSVPDIFRPFGAYLLYG
LRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNNADDEDGWPAPAVRN
CPVRRSPRVLT
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00583 |
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PF00583 |
|
Hover here to show all domains |
TTGCCGAGTACGGCGAGGCGGCGGA...
TTGCCGAGTACGGCGAGGCGGCGGAGATGGTCGGGCTCATCAAGGCCTGCGTTAGGGTGGTGAGCAGAGGCGGCGGCAAGAAACAGAAACCTTCTTCCTCCACGAAGGAGGAGCCGTCGCCGCCGGCGTACGTGAAGGTGGCCTGCCTCCTCGGTCTCAGGGTCTCTCCGTCTCACAGGCGGCTGGGGATCGCGACGGCGCTGGTGGAGCGCGCGGAGGAGTGGTGCCGTGAGCGCGGTGCGGCGCACGCGACGATGGCGACGACCACGTCCAACGCGGCGTCACTGGCGCTGTTCACGGGCCGGTTCGGGTACACACCGTTCCGGCGGCCGGAGTTGCTGGGAAGGCCGGTGCACGCGCACCGCCTGCCCATCCCGAGCGCGCACCGCGTGTTCCAGCTGCCGCCGCCGCTGGCGGCCGCGGCCTACGCGCGCCTGTCCCCGCCGCAGGCCACGGAGTTCCTCCCCGCCGACATGCCGGCGCTGCTGGCCCACAAGCTCACGCTGGGCACGTTCGTGGCCGTCGAGAGCGGCCCGCCGGAGCCGGACCAGTCCGCGCCCCCGTCCTTCGCCGTGCTCAGCGTCTGGGACTCCACCCGCTCCATGCGCCTCCGCGTGCGCGGCGCGCGCGCGCTGCTCCGCGCGTCGCTCGCCGCGCTCAGGGCGCTCGACCGTGGCGCGCCGTGGATGCGCGTCCCCTCCGTCCCGGACATCTTCCGCCCCTTCGGCGCCTACCTCCTCTACGGCCTCCGCATGTCCGGCCCCGCGGGCCCCGCCCTGCTCCGCTCCCTCTGCCACCACGCTCACAACGTGGCCCGCAACAACCCGGCCTGCGCCGTCGTCGCCGCCGACGTTGCGCCCGACGACCCGGCCGCCGCTGCCGTTCCGAGGTGGCGCCGCTTCTCCTGCGACGAGGACGTCTGGTGCATCAAGAACCTCAACAATGCCGACGACGAGGATGGCTGGCCGGCGCCGGCCGTCCGGAACTGTCCTGTTCGTCGATCCCCGCGAGTTCTGACGTAGCCGTGGCACGGACCGAGCCTTGCATGTCAGGTGTAGGCAGAGGGCTAACCACCTCGCTTCTGCCAAGTTTTGACATCTACACACGTGTACATACATGGTACCGCAATGGCTATGACCTGCCTTGCCATTTGTGGTATCAAACCATGCACCCAAGCTGAAGTGATGATGTCTATCTGTAACGGTAGCATTTGCTTCTAGATAGAATAGCGAC
MDGEKKVSFRVREFDMESDLAAVEELERRCQVGLCGDDTAADDGSTGGSKMRKKTKRKKKGMSLCVEQVGDPLARVRHAP
EHVMLVAEYGEAAEMVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEW
CRERGAAHATMATTTSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFL
PADMPALLAHKLTLGTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSV
PDIFRPFGAYLLYGLRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNN
ADDEDGWPAPAVRNCPVRRSPRVLT
GAGGTCAGCGTCATGGATGGAGAGA...
GAGGTCAGCGTCATGGATGGAGAGAAGAAGGTGTCGTTTAGGGTGAGGGAGTTCGACATGGAGAGCGACCTGGCGGCGGTCGAGGAGCTCGAGCGCCGGTGCCAGGTCGGCCTGTGCGGTGACGACACCGCAGCCGACGACGGCAGTACTGGCGGCAGCAAGATGAGGAAGAAGACAAAGAGAAAGAAGAAGGGCATGTCGCTCTGCGTCGAGCAGGTCGGCGACCCGCTGGCGAGGGTCCGCCACGCGCCGGAGCACGTCATGCTGGTTGCCGAGTACGGCGAGGCGGCGGAGATGGTCGGGCTCATCAAGGCCTGCGTTAGGGTGGTGAGCAGAGGCGGCGGCAAGAAACAGAAACCTTCTTCCTCCACGAAGGAGGAGCCGTCGCCGCCGGCGTACGTGAAGGTGGCCTGCCTCCTCGGTCTCAGGGTCTCTCCGTCTCACAGGCGGCTGGGGATCGCGACGGCGCTGGTGGAGCGCGCGGAGGAGTGGTGCCGTGAGCGCGGTGCGGCGCACGCGACGATGGCGACGACCACGTCCAACGCGGCGTCACTGGCGCTGTTCACGGGCCGGTTCGGGTACACACCGTTCCGGCGGCCGGAGTTGCTGGGAAGGCCGGTGCACGCGCACCGCCTGCCCATCCCGAGCGCGCACCGCGTGTTCCAGCTGCCGCCGCCGCTGGCGGCCGCGGCCTACGCGCGCCTGTCCCCGCCGCAGGCCACGGAGTTCCTCCCCGCCGACATGCCGGCGCTGCTGGCCCACAAGCTCACGCTGGGCACGTTCGTGGCCGTCGAGAGCGGCCCGCCGGAGCCGGACCAGTCCGCGCCCCCGTCCTTCGCCGTGCTCAGCGTCTGGGACTCCACCCGCTCCATGCGCCTCCGCGTGCGCGGCGCGCGCGCGCTGCTCCGCGCGTCGCTCGCCGCGCTCAGGGCGCTCGACCGTGGCGCGCCGTGGATGCGCGTCCCCTCCGTCCCGGACATCTTCCGCCCCTTCGGCGCCTACCTCCTCTACGGCCTCCGCATGTCCGGCCCCGCGGGCCCCGCCCTGCTCCGCTCCCTCTGCCACCACGCTCACAACGTGGCCCGCAACAACCCGGCCTGCGCCGTCGTCGCCGCCGACGTTGCGCCCGACGACCCGGCCGCCGCTGCCGTTCCGAGGTGGCGCCGCTTCTCCTGCGACGAGGACGTCTGGTGCATCAAGAACCTCAACAATGCCGACGACGAGGATGGCTGGCCGGCGCCGGCCGTCCGGAACTGTCCTGTTCGTCGATCCCCGCGAGTTCTGACGTAG
MDGEKKVSFRVREFDMESDLAAVEELERRCQVGLCGDDTAADDGSTGGSKMRKKTKRKKKGMSLCVEQVGDPLARVRHAP
EHVMLVAEYGEAAEMVGLIKACVRVVSRGGGKKQKPSSSTKEEPSPPAYVKVACLLGLRVSPSHRRLGIATALVERAEEW
CRERGAAHATMATTTSNAASLALFTGRFGYTPFRRPELLGRPVHAHRLPIPSAHRVFQLPPPLAAAAYARLSPPQATEFL
PADMPALLAHKLTLGTFVAVESGPPEPDQSAPPSFAVLSVWDSTRSMRLRVRGARALLRASLAALRALDRGAPWMRVPSV
PDIFRPFGAYLLYGLRMSGPAGPALLRSLCHHAHNVARNNPACAVVAADVAPDDPAAAAVPRWRRFSCDEDVWCIKNLNN
ADDEDGWPAPAVRNCPVRRSPRVLT
ATGGATGGAGAGAAGAAGGTGTCGT...
ATGGATGGAGAGAAGAAGGTGTCGTTTAGGGTGAGGGAGTTCGACATGGAGAGCGACCTGGCGGCGGTCGAGGAGCTCGAGCGCCGGTGCCAGGTCGGCCTGTGCGGTGACGACACCGCAGCCGACGACGGCAGTACTGGCGGCAGCAAGATGAGGAAGAAGACAAAGAGAAAGAAGAAGGGCATGTCGCTCTGCGTCGAGCAGGTCGGCGACCCGCTGGCGAGGGTCCGCCACGCGCCGGAGCACGTCATGCTGGTTGCCGAGTACGGCGAGGCGGCGGAGATGGTCGGGCTCATCAAGGCCTGCGTTAGGGTGGTGAGCAGAGGCGGCGGCAAGAAACAGAAACCTTCTTCCTCCACGAAGGAGGAGCCGTCGCCGCCGGCGTACGTGAAGGTGGCCTGCCTCCTCGGTCTCAGGGTCTCTCCGTCTCACAGGCGGCTGGGGATCGCGACGGCGCTGGTGGAGCGCGCGGAGGAGTGGTGCCGTGAGCGCGGTGCGGCGCACGCGACGATGGCGACGACCACGTCCAACGCGGCGTCACTGGCGCTGTTCACGGGCCGGTTCGGGTACACACCGTTCCGGCGGCCGGAGTTGCTGGGAAGGCCGGTGCACGCGCACCGCCTGCCCATCCCGAGCGCGCACCGCGTGTTCCAGCTGCCGCCGCCGCTGGCGGCCGCGGCCTACGCGCGCCTGTCCCCGCCGCAGGCCACGGAGTTCCTCCCCGCCGACATGCCGGCGCTGCTGGCCCACAAGCTCACGCTGGGCACGTTCGTGGCCGTCGAGAGCGGCCCGCCGGAGCCGGACCAGTCCGCGCCCCCGTCCTTCGCCGTGCTCAGCGTCTGGGACTCCACCCGCTCCATGCGCCTCCGCGTGCGCGGCGCGCGCGCGCTGCTCCGCGCGTCGCTCGCCGCGCTCAGGGCGCTCGACCGTGGCGCGCCGTGGATGCGCGTCCCCTCCGTCCCGGACATCTTCCGCCCCTTCGGCGCCTACCTCCTCTACGGCCTCCGCATGTCCGGCCCCGCGGGCCCCGCCCTGCTCCGCTCCCTCTGCCACCACGCTCACAACGTGGCCCGCAACAACCCGGCCTGCGCCGTCGTCGCCGCCGACGTTGCGCCCGACGACCCGGCCGCCGCTGCCGTTCCGAGGTGGCGCCGCTTCTCCTGCGACGAGGACGTCTGGTGCATCAAGAACCTCAACAATGCCGACGACGAGGATGGCTGGCCGGCGCCGGCCGTCCGGAACTGTCCTGTTCGTCGATCCCCGCGAGTTCTGACGTAG
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